Detailed information of matrix profile UN1210.1

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Profile summary

Name: GATA5::ONECUT1
Matrix ID: UN1210.1
Class: Other C4 zinc finger-type factors::Homeo domain factors
Family: C4-GATA-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9BWX5   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 260 247 866 121 49 206 681 234 232 450 442 289 373 155 997 28 6 167 957 135 ]
C [ 85 72 57 147 695 59 148 227 429 122 294 88 274 71 5 9 771 8 96 33 ]
G [ 140 219 131 38 58 497 123 107 141 244 266 211 69 486 61 7 8 842 22 30 ]
T [ 627 574 58 806 310 350 160 544 310 296 110 524 396 400 49 1068 327 95 37 914 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1210.1 UN1210 1 GATA5::ONECUT1 Homo sapiens
C4-GATA-related::HD-CUT Other C4 zinc finger-type factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: