Detailed information of matrix profile UN1210.1

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Profile summary

Name: GATA5::ONECUT1
Matrix ID: UN1210.1
Class: Other C4 zinc finger-type factors::Homeo domain factors
Family: C4-GATA-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9BWX5   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 914 37 95 327 1068 49 400 396 524 110 296 310 544 160 350 310 806 58 574 627 ]
C [ 30 22 842 8 7 61 486 69 211 266 244 141 107 123 497 58 38 131 219 140 ]
G [ 33 96 8 771 9 5 71 274 88 294 122 429 227 148 59 695 147 57 72 85 ]
T [ 135 957 167 6 28 997 155 373 289 442 450 232 234 681 206 49 121 866 247 260 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1210.1 UN1210 1 GATA5::ONECUT1 Homo sapiens
C4-GATA-related::HD-CUT Other C4 zinc finger-type factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: