Detailed information of matrix profile UN1205.1

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Profile summary

Name: GATA3::ONECUT1
Matrix ID: UN1205.1
Class: Other C4 zinc finger-type factors::Homeo domain factors
Family: C4-GATA-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P23771   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 231 1074 164 666 631 261 350 335 424 505 342 1154 60 50 291 1209 60 ]
C [ 36 82 43 236 146 300 308 332 269 450 107 34 82 906 34 16 130 ]
G [ 833 70 32 46 222 387 411 378 304 121 380 57 31 51 971 36 17 ]
T [ 212 86 1073 364 313 364 243 267 315 236 483 67 1139 305 16 51 1105 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1205.1 UN1205 1 GATA3::ONECUT1 Homo sapiens
C4-GATA-related::HD-CUT Other C4 zinc finger-type factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: