Detailed information of matrix profile UN1177.1

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Profile summary

Name: BHLHE22::OTP
Matrix ID: UN1177.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: Tal-related::Paired-related HD factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q8NFJ8   Q5XKR4  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1009 78 2395 10 2623 30 3 50 162 996 358 274 1373 2510 1 64 2307 ]
C [ 1013 2592 4 24 31 218 3 726 609 449 1053 1096 728 97 9 295 43 ]
G [ 597 1 216 19 10 8 2606 929 77 547 476 170 393 62 0 14 45 ]
T [ 58 6 62 2624 13 2421 65 972 1829 685 790 1137 183 8 2667 2304 282 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1177.1 UN1177 1 BHLHE22::OTP Homo sapiens
Tal-related::Paired-related HD factors Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: