Detailed information of matrix profile UN1172.1

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Profile summary

Name: ATOH1::HOXC10
Matrix ID: UN1172.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: Tal-related::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q92858   Q9NYD6  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 14 59 141 5 200 248 229 163 55 54 89 117 12 256 1 180 11 0 ]
C [ 75 185 7 12 7 8 27 33 101 55 65 89 264 1 12 76 29 1 ]
G [ 22 7 107 6 7 7 7 21 75 112 83 58 0 14 40 20 0 269 ]
T [ 165 25 21 253 62 13 13 59 45 55 39 12 0 5 223 0 236 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1172.1 UN1172 1 ATOH1::HOXC10 Homo sapiens
Tal-related::HOX Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: