Detailed information of matrix profile UN1161.1

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Profile summary

Name: USF2::GABPA
Matrix ID: UN1161.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: bHLH-ZIP::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q15853   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 4 160 0 11 1 1 177 4 9 0 0 187 168 28 6 ]
C [ 179 8 113 9 3 1 1 176 176 0 1 1 1 3 29 ]
G [ 6 9 9 169 3 182 7 6 3 189 186 1 1 158 11 ]
T [ 0 12 67 0 182 5 4 3 1 0 2 0 19 0 143 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1161.1 UN1161 1 USF2::GABPA Homo sapiens
bHLH-ZIP::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: