Detailed information of matrix profile UN1141.1

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Profile summary

Name: TBX3::GABPA
Matrix ID: UN1141.1
Class: T-Box factors::Tryptophan cluster factors
Family: TBX2-related factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15119   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 325 63 21 1 0 437 356 101 4 199 339 0 422 10 27 58 ]
C [ 29 309 424 0 0 2 12 45 7 82 6 436 1 418 292 64 ]
G [ 65 67 0 444 444 0 2 292 3 130 77 5 19 13 63 28 ]
T [ 26 6 0 0 1 6 75 7 431 34 23 4 3 4 63 295 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1141.1 UN1141 1 TBX3::GABPA Homo sapiens
TBX2-related factors::Ets-related T-Box factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: