Detailed information of matrix profile UN1137.1

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Profile summary

Name: SOX9::TBX6
Matrix ID: UN1137.1
Class: High-mobility group (HMG) domain factors::T-Box factors
Family: SOX-related factors::TBX6-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P48436   O95947  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1766 2513 15 2571 2447 21 1894 109 14 2 25 260 230 1864 ]
C [ 198 1 2486 2 18 61 9 724 12 17 1 618 440 10 ]
G [ 460 40 32 17 120 14 615 1663 2565 0 2567 49 1083 400 ]
T [ 169 39 60 3 8 2497 75 97 2 2574 0 1666 840 319 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1137.1 UN1137 1 SOX9::TBX6 Homo sapiens
SOX-related factors::TBX6-related factors High-mobility group (HMG) domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: