Detailed information of matrix profile UN1133.1

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Profile summary

Name: SOHLH2::FLI1
Matrix ID: UN1133.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: PAS domain factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9NX45   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 40 33 473 15 15 20 44 6 172 33 1 0 0 19 57 ]
C [ 89 521 30 537 19 71 17 489 3 8 588 590 8 122 182 ]
G [ 347 18 48 20 547 26 525 12 18 3 3 0 491 382 28 ]
T [ 117 21 42 21 12 476 7 86 400 549 1 3 94 70 326 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1133.1 UN1133 1 SOHLH2::FLI1 Homo sapiens
PAS domain factors::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: