Detailed information of matrix profile UN1133.1

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Profile summary

Name: SOHLH2::FLI1
Matrix ID: UN1133.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: PAS domain factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9NX45   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 326 70 94 3 1 549 400 86 7 476 12 21 42 21 117 ]
C [ 28 382 491 0 3 3 18 12 525 26 547 20 48 18 347 ]
G [ 182 122 8 590 588 8 3 489 17 71 19 537 30 521 89 ]
T [ 57 19 0 0 1 33 172 6 44 20 15 15 473 33 40 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1133.1 UN1133 1 SOHLH2::FLI1 Homo sapiens
PAS domain factors::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: