Detailed information of matrix profile UN1070.1

  1. Home
  2. Matrix > UN1070.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXD13::TBX21
Matrix ID: UN1070.1
Class: Homeo domain factors::T-Box factors
Family: HOX::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P35453   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 187 54 46 334 961 46 146 787 24 5 1 6 105 71 754 ]
C [ 44 38 13 42 38 449 4 0 33 78 34 1 334 138 21 ]
G [ 322 61 35 16 37 13 633 254 876 960 5 1037 41 507 216 ]
T [ 498 898 957 659 15 543 268 10 118 8 1011 7 571 335 60 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1070.1 UN1070 1 HOXD13::TBX21 Homo sapiens
HOX::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: