Detailed information of matrix profile UN1053.1

  1. Home
  2. Matrix > UN1053.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXA10::SOX11
Matrix ID: UN1053.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: HOX::SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P31260   P35716  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 137 128 48 360 1029 99 100 713 50 67 82 614 21 3 113 26 87 ]
C [ 128 41 14 17 7 419 76 35 488 654 866 8 14 8 10 17 295 ]
G [ 192 72 55 17 133 19 644 353 173 287 25 37 45 1 1027 3 145 ]
T [ 717 933 1057 780 5 637 354 73 463 166 201 515 1094 1162 24 1128 647 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1053.1 UN1053 1 HOXA10::SOX11 Homo sapiens
HOX::SOX-related factors Homeo domain factors::High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: