Detailed information of matrix profile UN1053.1

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Profile summary

Name: HOXA10::SOX11
Matrix ID: UN1053.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: HOX::SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P31260   P35716  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 647 1128 24 1162 1094 515 201 166 463 73 354 637 5 780 1057 933 717 ]
C [ 145 3 1027 1 45 37 25 287 173 353 644 19 133 17 55 72 192 ]
G [ 295 17 10 8 14 8 866 654 488 35 76 419 7 17 14 41 128 ]
T [ 87 26 113 3 21 614 82 67 50 713 100 99 1029 360 48 128 137 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1053.1 UN1053 1 HOXA10::SOX11 Homo sapiens
HOX::SOX-related factors Homeo domain factors::High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: