Detailed information of matrix profile UN1039.1

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Profile summary

Name: GCM1::GABPA
Matrix ID: UN1039.1
Class: GCM domain factors::Tryptophan cluster factors
Family: GCM::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9NP62   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 231 1 24 0 3 0 3 5 2 24 40 9 248 15 ]
C [ 28 246 1 3 301 307 3 280 285 267 36 262 36 43 ]
G [ 40 3 11 3 3 0 297 17 11 8 209 15 15 9 ]
T [ 8 57 271 301 0 0 4 5 9 8 22 21 8 240 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1039.1 UN1039 1 GCM1::GABPA Homo sapiens
GCM::Ets-related GCM domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: