Detailed information of matrix profile UN1039.1

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Profile summary

Name: GCM1::GABPA
Matrix ID: UN1039.1
Class: GCM domain factors::Tryptophan cluster factors
Family: GCM::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9NP62   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 240 8 21 22 8 9 5 4 0 0 301 271 57 8 ]
C [ 9 15 15 209 8 11 17 297 0 3 3 11 3 40 ]
G [ 43 36 262 36 267 285 280 3 307 301 3 1 246 28 ]
T [ 15 248 9 40 24 2 5 3 0 3 0 24 1 231 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1039.1 UN1039 1 GCM1::GABPA Homo sapiens
GCM::Ets-related GCM domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: