Detailed information of matrix profile UN0952.1

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Profile summary

Name: EGR1::TEAD4
Matrix ID: UN0952.1
Class: C2H2 zinc finger factors::TEA domain factors
Family: C2H2 zinc finger factors::TEF-1-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P18146   Q15561  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 852 128 776 41 37 69 1596 15 532 47 1933 643 2196 51 498 179 61 1083 ]
C [ 1179 2006 34 2231 2292 1964 656 2278 73 2048 25 1622 39 60 64 2043 1772 135 ]
G [ 73 18 1322 11 10 53 54 10 1512 63 354 40 24 15 129 61 43 304 ]
T [ 245 197 217 66 10 263 43 46 232 191 37 44 90 2223 1658 66 473 827 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0952.1 UN0952 1 EGR1::TEAD4 Homo sapiens
C2H2 zinc finger factors::TEF-1-related factors C2H2 zinc finger factors::TEA domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: