Detailed information of matrix profile UN0923.1

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Profile summary

Name: VSX2::SOX11
Matrix ID: UN0923.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: Paired-related HD factors::SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P58304   P35716  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 193 1165 1304 60 209 598 339 369 619 542 1267 20 1299 1221 626 413 ]
C [ 176 40 10 59 108 82 306 309 158 253 21 1122 15 67 103 43 ]
G [ 56 79 21 116 295 626 548 302 364 376 33 95 19 26 33 826 ]
T [ 927 68 17 1117 740 46 159 372 211 181 31 115 19 38 590 70 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0923.1 UN0923 1 VSX2::SOX11 Homo sapiens
Paired-related HD factors::SOX-related factors Homeo domain factors::High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: