Detailed information of matrix profile MA2733.1

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Profile summary
Name: Sl-ERF_F_4
Matrix ID: MA2733.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: A0A3Q7HF92  
Source: GSE172260
Comment: Validated by inference and motif similarity with RAP2-6

Sequence logo

Frequency matrix

         
A [ 61 33 214 41 21 200 30 18 64 33 15 44 31 19 35 51 28 43 225 ]
C [ 50 348 174 24 368 191 14 405 368 8 383 390 1 393 398 10 183 373 29 ]
G [ 301 35 25 375 13 22 386 12 14 409 20 12 421 21 10 384 38 20 155 ]
T [ 51 47 50 23 61 50 33 28 17 13 45 17 10 30 20 18 214 27 54 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2733.1 MA2733 1 Sl-ERF_F_4 Solanum lycopersicum
ERF/DREB AP2/EREBP
     

-log(P-value) = 0.0

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