Detailed information of matrix profile MA2467.1

  1. Home
  2. Matrix > MA2467.1

Profile summary
Name: pdm2
Matrix ID: MA2467.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: SELEX
Validation: 1685891
Uniprot ID: Q9VK71  
Source: 25779349
Comment: Validated by inference and motif similarity

Sequence logo

Frequency matrix

         
A [ 50 974 19 16 10 761 897 956 31 90 597 156 ]
C [ 81 0 47 5 816 11 19 12 30 102 115 160 ]
G [ 52 5 6 940 35 20 28 14 34 299 120 558 ]
T [ 816 20 926 37 137 207 54 16 904 506 165 123 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2467.1 MA2467 1 pdm2 Drosophila melanogaster
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: