Detailed information of matrix profile MA1991.1

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Profile summary
Name: Hnf1A
Matrix ID: MA1991.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 30420627
Uniprot ID: P22361  
Source: ReMap
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 235 177 103 18 19 16 16 30 1125 105 85 156 180 251 ]
C [ 316 348 744 1130 30 51 11 118 35 21 689 210 356 305 ]
G [ 319 386 204 39 7 60 12 1033 16 31 377 99 349 351 ]
T [ 379 338 198 62 1193 1122 1210 68 73 1092 98 784 364 342 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1991.1 MA1991 1 Hnf1A Mus musculus
POU domain factors Homeo domain factors
MA1991.2 MA1991 2 Hnf1A Mus musculus
POU domain factors Homeo domain factors
     

-log(P-value) = 6.20245

TFFM details

TFFM ID: TFFM0958.1

ChIP-seq Centrality
-log(P-value): 5386.26

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0958.1

ChIP-seq Centrality
-log(P-value): 6017.79

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: