Detailed information of matrix profile MA1939.1

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Profile summary
Name: ERF::SREBF2
Matrix ID: MA1939.1
Class: Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
Family: Ets-related::bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23050235
Uniprot ID: P50548   Q12772  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 73 93 58 5 2 373 373 227 4 37 373 0 0 30 0 299 7 ]
C [ 99 211 373 7 15 7 61 0 4 373 2 373 96 10 0 0 111 ]
G [ 122 162 1 373 373 0 0 146 13 7 4 5 373 8 373 24 8 ]
T [ 78 17 34 0 14 31 73 1 352 12 1 15 5 373 10 50 246 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1939.1 MA1939 1 ERF::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
MA1939.2 MA1939 2 ERF::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: