Detailed information of matrix profile MA1937.1

  1. Home
  2. Matrix > MA1937.1

Profile summary
Name: ERF::HOXB13
Matrix ID: MA1937.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P50548   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 741 450 545 19 28 2141 2141 845 69 619 1067 21 2141 2141 2141 696 ]
C [ 427 960 1597 4 0 49 284 193 795 634 94 175 213 18 463 501 ]
G [ 656 484 249 2141 2141 28 84 1296 93 335 1074 98 355 86 284 503 ]
T [ 316 247 35 7 36 41 725 37 1184 554 287 2141 1253 294 428 441 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1937.1 MA1937 1 ERF::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
MA1937.2 MA1937 2 ERF::HOXB13 Homo sapiens
Ets-related::HOX-related factors Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: