Detailed information of matrix profile MA1219.2

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Profile summary
Name: ERF011
Matrix ID: MA1219.2
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 15319480 9952441
Uniprot ID: Q9SNE1  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 732 811 412 139 2305 13 8 23 2115 10 841 1197 733 749 ]
C [ 765 393 807 2130 7 2411 2427 12 74 2394 1106 437 629 508 ]
G [ 349 524 326 96 98 10 5 2401 47 14 275 268 367 526 ]
T [ 600 718 901 81 36 12 6 10 210 28 224 544 717 663 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1219.1 MA1219 1 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1219.2 MA1219 2 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1219.3 MA1219 3 ERF011 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     

-log(P-value) = 3846.21

TFFM details

TFFM ID: TFFM0835.1

ChIP-seq Centrality
-log(P-value): 2689.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0835.1

ChIP-seq Centrality
-log(P-value): 2643.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: