Detailed information of matrix profile MA1180.1

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Profile summary
Name: MYB3R4
Matrix ID: MA1180.1
Class: Tryptophan cluster factors
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q94FL9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 261 289 311 180 235 27 258 388 29 0 0 0 0 262 151 ]
C [ 91 48 33 69 102 71 2 1 566 595 0 0 0 3 115 ]
G [ 80 88 31 52 116 41 225 180 0 0 595 0 0 301 202 ]
T [ 163 170 220 294 142 456 110 26 0 0 0 595 595 29 127 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1180.1 MA1180 1 MYB3R4 Arabidopsis thaliana
MYB Tryptophan cluster factors
MA1180.2 MA1180 2 MYB3R4 Arabidopsis thaliana
MYB Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0363.1

ChIP-seq Centrality
-log(P-value): 2964.68

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0363.1

ChIP-seq Centrality
-log(P-value): 2960.51

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: