Detailed information of matrix profile UN1304.1

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Profile summary

Name: nhr-28
Matrix ID: UN1304.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation:
Uniprot ID: Q17905  
Source: 39438113
Comment: TF classification inferred by sequence similarity of its human homolog

Sequence logo

Frequency matrix

         
A [ 95 36 9 28 9 514 12 21 46 91 ]
C [ 39 30 8 19 9 5 11 34 322 34 ]
G [ 58 61 11 489 6 16 507 23 81 56 ]
T [ 359 424 523 15 527 16 21 473 102 370 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1304.1 UN1304 1 nhr-28 Caenorhabditis elegans
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 2.5e-33

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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