Detailed information of matrix profile UN1281.1

  1. Home
  2. Matrix > UN1281.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: TraesCS6A02G117600
Matrix ID: UN1281.1
Class: Homeo domain factors
Family: PHD
Collection: UNVALIDATED
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation:
Uniprot ID: A0A3B6NN28  
Source: 36376315
Comment:

Sequence logo

Frequency matrix

         
A [ 7018 26852 4044 3714 24074 3843 82 31890 563 254 30826 523 139 31192 383 1148 16642 2136 2399 ]
C [ 3253 1800 3251 1876 1871 2294 395 40 1626 12775 40 1428 1201 72 1434 15925 193 17233 3743 ]
G [ 2706 1954 22094 2141 1318 21707 706 143 29239 817 388 30053 174 388 30042 664 14892 10772 7863 ]
T [ 19155 1526 2743 24401 4869 4288 30949 59 704 18286 878 128 30618 480 273 14395 405 1991 18127 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1281.1 UN1281 1 TraesCS6A02G117600 Triticum aestivum
PHD Homeo domain factors
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: