Detailed information of matrix profile UN1272.1

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Profile summary

Name: SPBC16G5.17
Matrix ID: UN1272.1
Class: C6 zinc cluster factors
Family:
Collection: UNVALIDATED
Taxon: Fungi
Species: Schizosaccharomyces pombe
Data Type: ChIP-seq
Validation:
Uniprot ID: O60131  
Source: 40015273
Comment: TF classification inferred from its S. cerevisiae homolog

Sequence logo

Frequency matrix

         
A [ 0 0 0 1 0 0 10 8 1 1 0 ]
C [ 12 12 0 11 0 0 0 2 9 3 0 ]
G [ 0 0 9 0 12 11 0 1 0 0 12 ]
T [ 0 0 3 0 0 1 2 1 2 8 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1272.1 UN1272 1 SPBC16G5.17 Schizosaccharomyces pombe
C6 zinc cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: