Detailed information of matrix profile UN1246.1

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Profile summary

Name: GLYMA-18G297100
Matrix ID: UN1246.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Glycine max
Data Type: DAP-seq
Validation:
Uniprot ID: I1N5C2  
Source: 39695844
Comment:

Sequence logo

Frequency matrix

         
A [ 104 190 44 43 82 327 1133 241 954 143 103 109 72 357 53 108 1274 283 801 ]
C [ 70 710 699 1273 1204 118 43 75 28 63 106 46 25 133 6 8 6 48 100 ]
G [ 89 48 25 11 6 33 40 638 137 49 54 81 110 652 1255 1210 45 875 79 ]
T [ 1073 388 568 9 44 858 120 382 217 1081 1073 1100 1129 194 22 10 11 130 356 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1246.1 UN1246 1 GLYMA-18G297100 Glycine max
LBD Other C4 zinc finger-type factors
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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