Detailed information of matrix profile UN1246.1

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Profile summary

Name: GLYMA-18G297100
Matrix ID: UN1246.1
Class: Other C4 zinc finger-type factors
Family: LBD
Collection: UNVALIDATED
Taxon: Plants
Species: Glycine max
Data Type: DAP-seq
Validation:
Uniprot ID: I1N5C2  
Source: 39695844
Comment:

Sequence logo

Frequency matrix

         
A [ 356 130 11 10 22 194 1129 1100 1073 1081 217 382 120 858 44 9 568 388 1073 ]
C [ 79 875 45 1210 1255 652 110 81 54 49 137 638 40 33 6 11 25 48 89 ]
G [ 100 48 6 8 6 133 25 46 106 63 28 75 43 118 1204 1273 699 710 70 ]
T [ 801 283 1274 108 53 357 72 109 103 143 954 241 1133 327 82 43 44 190 104 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1246.1 UN1246 1 GLYMA-18G297100 Glycine max
LBD Other C4 zinc finger-type factors
     

-log(P-value) = 0.0

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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