Detailed information of matrix profile UN1211.1

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Profile summary

Name: GSC::ONECUT1
Matrix ID: UN1211.1
Class: Homeo domain factors
Family: Paired-related HD factors::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P56915   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 3410 10 12 1235 3944 408 1656 908 1050 436 2943 4003 241 439 ]
C [ 50 20 4048 94 12 9 774 1431 1268 155 92 18 205 2548 ]
G [ 532 5 23 2708 6 5 1220 943 1108 25 538 63 378 451 ]
T [ 128 4085 37 83 158 3698 470 838 694 3504 547 36 3296 682 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1211.1 UN1211 1 GSC::ONECUT1 Homo sapiens
Paired-related HD factors::HD-CUT Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: