Detailed information of matrix profile UN1211.1

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Profile summary

Name: GSC::ONECUT1
Matrix ID: UN1211.1
Class: Homeo domain factors
Family: Paired-related HD factors::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P56915   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 682 3296 36 547 3504 694 838 470 3698 158 83 37 4085 128 ]
C [ 451 378 63 538 25 1108 943 1220 5 6 2708 23 5 532 ]
G [ 2548 205 18 92 155 1268 1431 774 9 12 94 4048 20 50 ]
T [ 439 241 4003 2943 436 1050 908 1656 408 3944 1235 12 10 3410 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1211.1 UN1211 1 GSC::ONECUT1 Homo sapiens
Paired-related HD factors::HD-CUT Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: