Detailed information of matrix profile UN1209.1

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Profile summary

Name: GATA5::FLI1
Matrix ID: UN1209.1
Class: Other C4 zinc finger-type factors::Tryptophan cluster factor
Family: C4-GATA-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9BWX5   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 39 56 2 3 319 209 143 19 91 86 96 84 92 59 105 107 34 242 43 222 ]
C [ 198 274 0 6 7 22 24 100 98 115 65 53 76 80 105 90 22 30 40 22 ]
G [ 91 10 342 333 7 2 169 40 119 89 115 122 81 95 87 27 264 43 22 46 ]
T [ 16 4 0 2 11 111 8 185 36 54 68 85 95 110 47 120 24 29 239 54 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1209.1 UN1209 1 GATA5::FLI1 Homo sapiens
C4-GATA-related::Ets-related Other C4 zinc finger-type factors::Tryptophan cluster factor
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: