Detailed information of matrix profile UN1198.1

  1. Home
  2. Matrix > UN1198.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ETV5::ONECUT1
Matrix ID: UN1198.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P41161   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 655 6 15 131 672 15 201 237 160 60 83 295 24 71 4 0 0 3 61 78 ]
C [ 4 33 615 19 8 7 142 236 227 239 98 295 449 19 6 703 703 8 109 108 ]
G [ 37 10 11 551 6 3 53 118 99 283 156 73 55 36 12 2 3 641 431 90 ]
T [ 10 657 65 5 20 681 310 115 220 124 369 43 178 580 684 1 0 54 105 430 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1198.1 UN1198 1 ETV5::ONECUT1 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: