Detailed information of matrix profile UN1196.1

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Profile summary

Name: ERG::TBX6
Matrix ID: UN1196.1
Class: Tryptophan cluster factors::T-Box factors
Family: Ets-related::TBX6-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P11308   O95947  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1315 395 714 20 13 3121 2407 929 187 648 709 874 1894 354 0 12 7 345 183 2138 ]
C [ 197 1685 2392 11 15 44 75 120 964 424 715 446 161 477 18 222 0 490 860 101 ]
G [ 1325 1047 118 3205 3208 58 53 2176 472 1657 1320 1261 903 2345 3238 19 3253 281 1274 854 ]
T [ 429 139 42 30 30 43 731 41 1643 537 522 685 308 90 10 3013 6 2150 949 173 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1196.1 UN1196 1 ERG::TBX6 Homo sapiens
Ets-related::TBX6-related factors Tryptophan cluster factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: