Detailed information of matrix profile UN1191.1

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Profile summary

Name: EGR1::TBX6
Matrix ID: UN1191.1
Class: C2H2 zinc finger factors::T-Box factors
Family: C2H2 zinc finger factors::TBX6-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P18146   O95947  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 976 60 1183 94 165 194 385 369 349 456 294 331 754 50 397 10 56 23 1036 ]
C [ 292 1438 185 1434 1145 459 612 741 742 640 634 646 752 1556 27 1608 1509 1440 573 ]
G [ 162 45 195 57 204 78 188 209 325 318 337 170 60 10 1070 11 79 27 14 ]
T [ 226 113 93 71 142 925 471 337 240 242 391 509 90 40 162 27 12 166 33 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1191.1 UN1191 1 EGR1::TBX6 Homo sapiens
C2H2 zinc finger factors::TBX6-related factors C2H2 zinc finger factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: