Detailed information of matrix profile UN1182.1

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Profile summary

Name: CLOCK::ISL2
Matrix ID: UN1182.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: PAS domain factors::HD-LIM
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15516   Q96A47  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 27 382 3 31 6 1 11 134 132 87 105 73 59 234 285 35 35 118 ]
C [ 369 1 354 3 7 2 139 90 95 117 119 127 51 38 54 21 24 17 ]
G [ 0 13 2 366 5 366 86 77 83 65 132 72 25 92 25 207 129 243 ]
T [ 9 9 46 5 387 36 169 104 95 136 49 133 270 41 41 142 217 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1182.1 UN1182 1 CLOCK::ISL2 Homo sapiens
PAS domain factors::HD-LIM Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: