Detailed information of matrix profile UN1181.1

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Profile summary

Name: BHLHE22::ONECUT1
Matrix ID: UN1181.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: Tal-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q8NFJ8   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1310 33 10 335 1507 90 624 462 424 499 827 495 50 1168 71 1475 112 32 ]
C [ 3 14 1435 7 32 20 435 429 496 221 92 476 1449 31 58 72 134 15 ]
G [ 222 2 2 1193 3 11 196 428 347 403 351 524 65 287 102 21 18 1403 ]
T [ 44 1530 132 44 37 1458 324 260 312 456 309 84 15 93 1348 11 1315 129 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1181.1 UN1181 1 BHLHE22::ONECUT1 Homo sapiens
Tal-related::HD-CUT Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: