Detailed information of matrix profile UN1175.1

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Profile summary

Name: BARHL2::TCF4
Matrix ID: UN1175.1
Class: Homeo domain factors::Basic helix-loop-helix factors (bHLH)
Family: NK::E2A
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9NY43   P15884  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 167 15 528 3 56 1 1 35 198 237 123 37 229 272 11 10 462 ]
C [ 125 519 4 65 89 3 1 253 64 117 105 373 105 76 11 35 9 ]
G [ 233 2 3 456 388 0 535 71 170 89 191 34 136 24 4 16 16 ]
T [ 12 1 2 13 4 533 0 178 105 94 118 93 67 165 511 476 50 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1175.1 UN1175 1 BARHL2::TCF4 Homo sapiens
NK::E2A Homeo domain factors::Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: