Detailed information of matrix profile UN1168.1

  1. Home
  2. Matrix > UN1168.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: CREB1::IRF7
Matrix ID: UN1168.1
Class: Basic leucine zipper factors (bZIP)::Tryptophan cluster factors
Family: CREB-related factors::Interferon-regulatory factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P16220   Q92985  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 519 226 271 164 881 3076 827 6231 0 344 18 570 6869 126 ]
C [ 93 131 138 6414 826 1315 363 8 6842 54 67 6451 13 3443 ]
G [ 265 146 167 123 4827 711 375 179 21 6799 15 100 195 316 ]
T [ 6327 6701 6628 503 670 2102 5639 786 341 7 7104 83 127 3319 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1168.1 UN1168 1 CREB1::IRF7 Homo sapiens
CREB-related factors::Interferon-regulatory factors Basic leucine zipper factors (bZIP)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: