Detailed information of matrix profile UN1164.1

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Profile summary

Name: VAX2::GABPA
Matrix ID: UN1164.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: NK::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q5SQQ9   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 63 473 534 49 44 413 7 61 14 8 2 3 11 50 ]
C [ 35 17 6 29 52 4 442 10 10 532 545 19 136 163 ]
G [ 13 37 13 88 155 138 32 21 4 7 9 475 326 52 ]
T [ 447 31 5 392 307 3 77 466 530 11 2 61 85 293 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1164.1 UN1164 1 VAX2::GABPA Homo sapiens
NK::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: