Detailed information of matrix profile UN1155.1

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Profile summary

Name: TFE3::GABPA
Matrix ID: UN1155.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: bHLH-ZIP::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P19532   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1 31 2 2 0 2 4 1 2 98 2 21 18 0 ]
C [ 75 2 3 116 120 5 4 4 112 3 96 7 25 3 ]
G [ 8 7 5 1 2 99 108 8 3 11 7 92 10 114 ]
T [ 38 82 112 3 0 16 6 109 5 10 17 2 69 5 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1155.1 UN1155 1 TFE3::GABPA Homo sapiens
bHLH-ZIP::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: