Detailed information of matrix profile UN1146.1

  1. Home
  2. Matrix > UN1146.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: CLOCK::RUNX2
Matrix ID: UN1146.1
Class: Basic helix-loop-helix factors (bHLH)::Runt domain factors
Family: PAS domain factors::Runt-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15516   Q13950  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 337 489 16 39 107 52 602 320 100 761 0 20 1 2 ]
C [ 38 113 707 688 40 648 66 18 675 11 759 0 23 0 ]
G [ 377 77 39 31 597 34 74 436 0 6 1 758 2 763 ]
T [ 26 99 16 20 34 44 36 4 3 0 18 0 752 13 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1146.1 UN1146 1 CLOCK::RUNX2 Homo sapiens
PAS domain factors::Runt-related factors Basic helix-loop-helix factors (bHLH)::Runt domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: