Detailed information of matrix profile UN1136.1

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Profile summary

Name: SOX9::TBX21
Matrix ID: UN1136.1
Class: High-mobility group (HMG) domain factors::T-Box factors
Family: SOX-related factors::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P48436   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 3222 4703 50 5024 5047 1567 1574 546 1772 4290 54 4990 41 361 230 ]
C [ 847 48 4862 43 36 66 228 3911 1965 472 5026 38 5050 4123 1009 ]
G [ 596 70 136 66 41 52 3038 509 1363 248 47 99 43 259 79 ]
T [ 499 343 116 31 40 3479 324 198 64 154 37 37 30 421 3846 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1136.1 UN1136 1 SOX9::TBX21 Homo sapiens
SOX-related factors::TBrain-related factors High-mobility group (HMG) domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: