Detailed information of matrix profile UN1130.1

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Profile summary

Name: SHOX::FLI1
Matrix ID: UN1130.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: Paired-related HD factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15266   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 34 122 145 15 12 100 13 47 6 2 0 0 8 ]
C [ 12 13 8 23 32 15 85 1 1 166 168 1 41 ]
G [ 6 14 9 20 25 52 21 5 1 0 0 131 88 ]
T [ 117 20 7 111 100 2 50 116 161 1 1 37 32 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1130.1 UN1130 1 SHOX::FLI1 Homo sapiens
Paired-related HD factors::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: