Detailed information of matrix profile UN1121.1

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Profile summary

Name: PITX3::FOXA1
Matrix ID: UN1121.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: Paired-related HD factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O75364   P55317  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 35 360 393 11 32 11 56 94 255 157 78 5 299 340 356 2 343 ]
C [ 9 0 0 4 290 327 116 17 18 29 17 152 63 40 5 262 24 ]
G [ 1 19 0 61 55 13 36 10 90 35 276 2 7 2 17 11 5 ]
T [ 348 14 0 317 16 42 185 272 30 172 22 234 24 11 15 118 21 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1121.1 UN1121 1 PITX3::FOXA1 Homo sapiens
Paired-related HD factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: