Detailed information of matrix profile UN1115.1

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Profile summary

Name: PDX1::TBX21
Matrix ID: UN1115.1
Class: Homeo domain factors::T-Box factors
Family: HOX::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P52945   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 410 1539 2219 104 49 2048 2255 4 3176 69 373 212 ]
C [ 1235 1261 693 98 197 925 70 3419 7 3260 2352 452 ]
G [ 258 278 207 269 5 197 844 8 237 93 358 55 ]
T [ 1536 361 320 2968 3188 269 270 8 19 17 356 2720 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1115.1 UN1115 1 PDX1::TBX21 Homo sapiens
HOX::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: