Detailed information of matrix profile UN1108.1

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Profile summary

Name: PAX5::FOXD2
Matrix ID: UN1108.1
Class: Paired box factors::Fork head/winged helix factors
Family: Paired domain only::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q02548   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 735 730 134 245 459 2291 113 1088 13 3592 75 619 375 3031 214 340 91 1364 323 243 2498 ]
C [ 547 25 283 34 24 55 1938 444 851 8 25 485 2499 510 3314 92 2930 557 1439 1503 160 ]
G [ 267 3878 26 512 681 1499 326 987 47 267 4458 159 277 416 80 4193 1543 720 92 2341 1848 ]
T [ 3096 12 4202 3854 3481 800 2268 2126 3734 778 87 3382 1494 688 1037 20 81 2004 2791 558 139 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1108.1 UN1108 1 PAX5::FOXD2 Homo sapiens
Paired domain only::FOX Paired box factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: