Detailed information of matrix profile UN1108.1

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Profile summary

Name: PAX5::FOXD2
Matrix ID: UN1108.1
Class: Paired box factors::Fork head/winged helix factors
Family: Paired domain only::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q02548   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 139 558 2791 2004 81 20 1037 688 1494 3382 87 778 3734 2126 2268 800 3481 3854 4202 12 3096 ]
C [ 1848 2341 92 720 1543 4193 80 416 277 159 4458 267 47 987 326 1499 681 512 26 3878 267 ]
G [ 160 1503 1439 557 2930 92 3314 510 2499 485 25 8 851 444 1938 55 24 34 283 25 547 ]
T [ 2498 243 323 1364 91 340 214 3031 375 619 75 3592 13 1088 113 2291 459 245 134 730 735 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1108.1 UN1108 1 PAX5::FOXD2 Homo sapiens
Paired domain only::FOX Paired box factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: