Detailed information of matrix profile UN1107.1

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Profile summary

Name: PAX1::FOXD2
Matrix ID: UN1107.1
Class: Paired box factors::Fork head/winged helix factors
Family: Paired domain only::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P15863   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1359 786 150 275 639 4442 81 1860 6 7739 17 817 322 7138 246 534 61 2818 379 455 6078 ]
C [ 769 53 525 19 5 21 3716 496 1549 21 5 408 5730 768 6959 26 6336 1079 2739 3092 244 ]
G [ 357 8370 10 464 924 3542 155 1153 10 235 9044 67 209 562 74 8645 2641 670 141 4509 2715 ]
T [ 6758 34 8558 8485 7675 1238 5291 5734 7678 1248 177 7951 2982 775 1964 38 205 4676 5984 1187 206 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1107.1 UN1107 1 PAX1::FOXD2 Homo sapiens
Paired domain only::FOX Paired box factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: