Detailed information of matrix profile UN1104.1

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Profile summary

Name: OTX1::FOXD2
Matrix ID: UN1104.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: Paired-related HD factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P32242   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 57 24 10 11 29 304 13 98 19 311 308 83 94 39 383 4 38 438 ]
C [ 31 4 11 2 2 2 218 61 63 1 14 115 32 35 86 5 26 7 ]
G [ 10 479 2 27 63 175 36 114 15 16 111 230 347 399 18 7 5 19 ]
T [ 412 3 487 470 416 29 243 237 413 182 77 82 37 37 23 494 441 46 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1104.1 UN1104 1 OTX1::FOXD2 Homo sapiens
Paired-related HD factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: